Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | EC382_RS11310 | Not Available | Negative | 2396944 - 2397744 | 28635.2 |
| hydroxyethylthiazole kinase | EC382_RS11315 | Not Available | Negative | 2397741 - 2398529 | 27401.8 |
| autotransporter outer membrane beta-barrel domain-containing protein | EC382_RS11320 | Not Available | Negative | 2399904 - 2400934 | 35109.7 |
| atpase | EC382_RS11325 | Not Available | Negative | 2400999 - 2401118 | 4155.98 |
| hypothetical protein | EC382_RS11330 | Not Available | Negative | 2401079 - 2401264 | 7391.39 |
| hypothetical protein | EC382_RS11335 | Not Available | Positive | 2401365 - 2401538 | 6518.21 |
| glycine zipper family protein | EC382_RS11340 | Not Available | Positive | 2401600 - 2401884 | 8685.77 |
| ymgd family protein | EC382_RS11345 | Not Available | Positive | 2401888 - 2402223 | 12114.9 |
| autotransporter outer membrane beta-barrel domain-containing protein | EC382_RS11350 | Not Available | Negative | 2402279 - 2404600 | 82479.5 |
| hypothetical protein | EC382_RS11355 | Not Available | Negative | 2405327 - 2405545 | 8228.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





