Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attr | Not Available | Not Available | Positive | 2711300 - 2711312 | Not Available |
| Putative integrase | EC382_RS12920 | Not Available | Positive | 2711455 - 2712741 | 48690.3 |
| duf72 domain-containing protein | EC382_RS12925 | Not Available | Positive | 2712746 - 2713522 | 29665.6 |
| hypothetical protein | EC382_RS12930 | Not Available | Positive | 2713575 - 2713970 | 15227.2 |
| Trna (cmo5u34)-methyltransferase | EC382_RS12935 | Not Available | Positive | 2714011 - 2714754 | 27792.3 |
| Tail fiber component | EC382_RS16790 | Not Available | Negative | 3546601 - 3547191 | 22261.3 |
| Attl | Not Available | Not Available | Positive | 3546725 - 3546736 | Not Available |
| Putative minor tail protein | EC382_RS16795 | Not Available | Negative | 3547196 - 3547894 | 25633.8 |
| Putative minor tail protein | EC382_RS16800 | Not Available | Negative | 3547904 - 3548233 | 12530.1 |
| Tail length tape measure protein | EC382_RS16805 | Not Available | Negative | 3548233 - 3551298 | 112209.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





