Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase baes | EC382_RS11205 | Not Available | Positive | 2377238 - 2378641 | 52047.4 |
| two-component system response regulator baer | EC382_RS11210 | Not Available | Positive | 2378638 - 2379360 | 27657.5 |
| yegp family protein | EC382_RS11215 | Not Available | Positive | 2379551 - 2379883 | 11994.9 |
| type ii toxin-antitoxin system pard family antitoxin | EC382_RS11220 | Not Available | Positive | 2380127 - 2380378 | 9554.46 |
| type ii toxin-antitoxin system rele/pare family toxin | EC382_RS11225 | Not Available | Positive | 2380380 - 2380676 | 11540.8 |
| trna 5-hydroxyuridine modification protein yegq | EC382_RS11230 | Not Available | Positive | 2380779 - 2382140 | 51182.1 |
| hypothetical protein | EC382_RS11235 | Not Available | Negative | 2382470 - 2382787 | 11498.0 |
| lipid kinase yegs | EC382_RS11240 | Not Available | Positive | 2383192 - 2384091 | 31956.5 |
| deor/glpr transcriptional regulator | EC382_RS11245 | Not Available | Negative | 2384173 - 2384952 | 27960.9 |
| galactitol-1-phosphate 5-dehydrogenase | EC382_RS11250 | Not Available | Negative | 2385052 - 2386092 | 37390.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





