Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein kinase yegi | EC382_RS11155 | Not Available | Negative | 2363808 - 2365748 | 71183.3 |
| protein-serine/threonine phosphatase pphc | EC382_RS11160 | Not Available | Negative | 2365745 - 2366506 | 27361.7 |
| vwa domain-containing protein | EC382_RS11165 | Not Available | Negative | 2366503 - 2367162 | 24125.8 |
| type i toxin-antitoxin system toxin ibsa | EC382_RS11170 | Not Available | Negative | 2367383 - 2367442 | 2232.03 |
| type i toxin-antitoxin system ibs family toxin | EC382_RS11175 | Not Available | Negative | 2367715 - 2367771 | 2136.9 |
| type i toxin-antitoxin system ibs family toxin | EC382_RS11180 | Not Available | Negative | 2368043 - 2368099 | 2079.86 |
| multidrug efflux rnd transporter subunit mdta | EC382_RS11185 | Not Available | Positive | 2368378 - 2369625 | 44483.9 |
| multidrug efflux rnd transporter permease subunit mdtb | EC382_RS11190 | Not Available | Positive | 2369625 - 2372747 | 112070.0 |
| multidrug efflux rnd transporter permease subunit mdtc | EC382_RS11195 | Not Available | Positive | 2372748 - 2375825 | 111033.0 |
| mfs transporter | EC382_RS11200 | Not Available | Positive | 2375826 - 2377241 | 50940.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





