Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1043 family protein | EC382_RS10955 | Not Available | Positive | 2314314 - 2314712 | 14961.7 |
| serine endoprotease degq | EC382_RS10960 | Not Available | Positive | 2314866 - 2316233 | 47207.9 |
| outer membrane-stress sensor serine endopeptidase degs | EC382_RS10965 | Not Available | Positive | 2316323 - 2317390 | 37583.4 |
| malate dehydrogenase | EC382_RS10970 | Not Available | Negative | 2317453 - 2318391 | 32339.2 |
| transcriptional regulator argr | EC382_RS10975 | Not Available | Positive | 2318826 - 2319296 | 16995.5 |
| peroxide/acid stress response protein yhcn | EC382_RS10980 | Not Available | Positive | 2319661 - 2319924 | 9196.89 |
| hypothetical protein | EC382_RS10985 | Not Available | Negative | 2319980 - 2320252 | 10766.7 |
| p-hydroxybenzoic acid efflux pump subunit aaeb | EC382_RS10990 | Not Available | Negative | 2320344 - 2322311 | 73628.9 |
| p-hydroxybenzoic acid efflux pump subunit aaea | EC382_RS10995 | Not Available | Negative | 2322317 - 2323249 | 34762.5 |
| aaex family protein | EC382_RS11000 | Not Available | Negative | 2323257 - 2323460 | 7847.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





