Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose-5-phosphate isomerase kdsd | EC382_RS10805 | Not Available | Positive | 2282417 - 2283403 | 35198.3 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | EC382_RS10810 | Not Available | Positive | 2283424 - 2283990 | 19998.3 |
| lps export abc transporter periplasmic protein lptc | EC382_RS10815 | Not Available | Positive | 2283987 - 2284562 | 21703.8 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | EC382_RS10820 | Not Available | Positive | 2284531 - 2285088 | 20128.1 |
| lps export abc transporter atp-binding protein | EC382_RS10825 | Not Available | Positive | 2285095 - 2285820 | 26802.3 |
| rna polymerase factor sigma-54 | EC382_RS10830 | Not Available | Positive | 2285868 - 2287301 | 53996.8 |
| ribosome hibernation promoting factor | EC382_RS10835 | Not Available | Positive | 2287324 - 2287611 | 10750.9 |
| pts iia-like nitrogen regulatory protein ptsn | EC382_RS10840 | Not Available | Positive | 2287729 - 2288220 | 17960.6 |
| rnase adapter rapz | EC382_RS10845 | Not Available | Positive | 2288266 - 2289120 | 32494.2 |
| pts phosphocarrier protein npr | EC382_RS10850 | Not Available | Positive | 2289117 - 2289389 | 9810.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





