Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropteroate synthase | EC382_RS10705 | Not Available | Negative | 2265360 - 2266208 | 30616.9 |
| atp-dependent zinc metalloprotease ftsh | EC382_RS10710 | Not Available | Negative | 2266298 - 2268232 | 70712.3 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | EC382_RS10715 | Not Available | Negative | 2268332 - 2268961 | 23336.4 |
| ribosome assembly rna-binding protein yhby | EC382_RS10720 | Not Available | Positive | 2269087 - 2269380 | 10784.4 |
| transcription elongation factor grea | EC382_RS10725 | Not Available | Negative | 2269536 - 2270012 | 17642.0 |
| serine-type d-ala-d-ala carboxypeptidase | EC382_RS10730 | Not Available | Positive | 2270260 - 2271693 | 51831.3 |
| obg family gtpase cgta | EC382_RS10735 | Not Available | Negative | 2271733 - 2272905 | 43230.2 |
| dmt family transporter | EC382_RS10740 | Not Available | Negative | 2272921 - 2273886 | 34965.2 |
| 50s ribosomal protein l27 | EC382_RS10745 | Not Available | Negative | 2274013 - 2274270 | 9125.01 |
| 50s ribosomal protein l21 | EC382_RS10750 | Not Available | Negative | 2274291 - 2274602 | 11565.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





