Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypochlorite stress dna-binding transcriptional regulator hypt | EC382_RS10605 | Not Available | Positive | 2244370 - 2245281 | 34698.6 |
| anti-adapter protein irad | EC382_RS10610 | Not Available | Negative | 2245274 - 2245666 | 14801.8 |
| irad leader peptide | EC382_RS10615 | Not Available | Negative | 2245663 - 2245746 | 3016.48 |
| duf2686 family protein | EC382_RS10620 | Not Available | Positive | 2246338 - 2247168 | 30735.7 |
| uxu operon transcriptional regulator | EC382_RS10625 | Not Available | Negative | 2247309 - 2248082 | 29291.8 |
| fructuronate reductase | EC382_RS10630 | Not Available | Negative | 2248297 - 2249757 | 53659.3 |
| mannonate dehydratase | EC382_RS10635 | Not Available | Negative | 2249838 - 2251022 | 44826.5 |
| gluconate permease gntp | EC382_RS10640 | Not Available | Positive | 2251362 - 2252705 | 47155.0 |
| type 1 fimbria d-mannose specific adhesin fimh | EC382_RS10645 | Not Available | Negative | 2252879 - 2253781 | 31446.2 |
| type 1 fimbria minor subunit fimg | EC382_RS10650 | Not Available | Negative | 2253801 - 2254304 | 17385.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





