Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction-modification system methyltransferase | EC382_RS10500 | Not Available | Positive | 2208500 - 2210089 | 59191.6 |
| restriction endonuclease subunit s | EC382_RS10505 | Not Available | Positive | 2210128 - 2211579 | 54321.6 |
| endoribonuclease syme | EC382_RS10510 | Not Available | Positive | 2211807 - 2212148 | 12310.8 |
| dead/deah box helicase | EC382_RS10515 | Not Available | Negative | 2212191 - 2218535 | 238203.0 |
| hypothetical protein | EC382_RS10520 | Not Available | Negative | 2218548 - 2221838 | 124030.0 |
| duf1127 domain-containing protein | EC382_RS10525 | Not Available | Negative | 2222334 - 2222498 | 6863.51 |
| plp-dependent aminotransferase family protein | EC382_RS10530 | Not Available | Positive | 2222675 - 2224087 | 53093.8 |
| rpn family recombination-promoting nuclease/putative transposase | EC382_RS10535 | Not Available | Negative | 2224329 - 2225273 | 36873.5 |
| multidrug efflux mfs transporter mdtm | EC382_RS10540 | Not Available | Positive | 2225740 - 2226972 | 44586.1 |
| duf445 domain-containing protein | EC382_RS10545 | Not Available | Positive | 2227013 - 2228293 | 48191.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





