Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-formyltetrahydrofolate cyclo-ligase | EC382_RS09615 | Not Available | Negative | 2034290 - 2034892 | 23302.5 |
| cell division protein zapa | EC382_RS09625 | Not Available | Negative | 2035138 - 2035467 | 12594.9 |
| upf0149 family protein ygfb | EC382_RS09630 | Not Available | Positive | 2035635 - 2036213 | 21230.8 |
| xaa-pro aminopeptidase | EC382_RS09635 | Not Available | Positive | 2036239 - 2037564 | 49813.2 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | EC382_RS09640 | Not Available | Positive | 2037561 - 2038739 | 42364.9 |
| fad-dependent 2-octaprenylphenol hydroxylase | EC382_RS09645 | Not Available | Positive | 2038762 - 2039964 | 44190.2 |
| hypothetical protein | EC382_RS09650 | Not Available | Negative | 2040038 - 2040121 | 3213.96 |
| glycine cleavage system aminomethyltransferase gcvt | EC382_RS09655 | Not Available | Positive | 2040412 - 2041506 | 40237.1 |
| glycine cleavage system protein gcvh | EC382_RS09660 | Not Available | Positive | 2041530 - 2041919 | 13839.9 |
| aminomethyl-transferring glycine dehydrogenase | EC382_RS09665 | Not Available | Positive | 2042037 - 2044910 | 104237.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





