Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | EC382_RS09565 | Not Available | Negative | 2021402 - 2022328 | 34211.8 |
| duf1471 domain-containing protein | EC382_RS09570 | Not Available | Positive | 2022604 - 2022864 | 8896.65 |
| catecholate siderophore receptor fiu | EC382_RS09575 | Not Available | Positive | 2023129 - 2025411 | 81874.3 |
| pkhd-type hydroxylase ybix | EC382_RS09580 | Not Available | Positive | 2025453 - 2026130 | 25530.2 |
| c4-type zinc finger protein ybii | EC382_RS09585 | Not Available | Positive | 2026204 - 2026470 | 9804.42 |
| duf1471 domain-containing protein | EC382_RS09590 | Not Available | Positive | 2026735 - 2026995 | 8568.2 |
| malate/lactate/ureidoglycolate dehydrogenase | EC382_RS09595 | Not Available | Negative | 2027224 - 2028309 | 38862.2 |
| dna-binding protein ybib | EC382_RS09600 | Not Available | Negative | 2028450 - 2029412 | 35046.7 |
| atp-dependent dna helicase ding | EC382_RS09605 | Not Available | Negative | 2029440 - 2031590 | 81463.9 |
| type iii secretion system effector espx2 | EC382_RS09610 | Not Available | Negative | 2031874 - 2033886 | 76858.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





