Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine abc transporter permease poth | EC382_RS09315 | Not Available | Negative | 1967579 - 1968532 | 35477.6 |
| putrescine abc transporter atp-binding subunit potg | EC382_RS09320 | Not Available | Negative | 1968542 - 1969675 | 41981.4 |
| spermidine/putrescine abc transporter substrate-binding protein potf | EC382_RS09325 | Not Available | Negative | 1969770 - 1970882 | 40827.7 |
| ybjn domain-containing protein | EC382_RS09330 | Not Available | Negative | 1971233 - 1971709 | 17667.1 |
| 30s ribosomal protein s6--l-glutamate ligase | EC382_RS09335 | Not Available | Negative | 1971797 - 1972699 | 32438.5 |
| nitroreductase nfsa | EC382_RS09340 | Not Available | Negative | 1972760 - 1973482 | 26848.2 |
| ybjc family protein | EC382_RS09345 | Not Available | Negative | 1973466 - 1973753 | 10551.4 |
| glutaredoxin 1 | EC382_RS09350 | Not Available | Positive | 1973913 - 1974170 | 9695.39 |
| hypothetical protein | EC382_RS09355 | Not Available | Negative | 1974200 - 1974577 | 14204.0 |
| aspartate:alanine antiporter | EC382_RS09360 | Not Available | Positive | 1974847 - 1976532 | 60355.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





