Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein deglycase yajl | EC382_RS09215 | Not Available | Positive | 1948178 - 1948768 | 20793.2 |
| trna 4-thiouridine(8) synthase thii | EC382_RS09220 | Not Available | Negative | 1948822 - 1950270 | 54935.3 |
| exodeoxyribonuclease vii small subunit | EC382_RS09225 | Not Available | Positive | 1950476 - 1950718 | 8952.42 |
| (2e,6e)-farnesyl diphosphate synthase | EC382_RS09230 | Not Available | Positive | 1950718 - 1951617 | 32161.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | EC382_RS09235 | Not Available | Positive | 1951642 - 1953504 | 67622.0 |
| 1-deoxyxylulose-5-phosphate synthase yajo | EC382_RS09240 | Not Available | Positive | 1953559 - 1954533 | 36424.2 |
| t3ss effector pentapeptide repeat protein espy3 | EC382_RS09245 | Not Available | Positive | 1954764 - 1955902 | 43520.3 |
| pentapeptide repeat-containing protein | EC382_RS09250 | Not Available | Negative | 1955903 - 1956265 | 13951.2 |
| lipoprotein | EC382_RS09255 | Not Available | Positive | 1956889 - 1957404 | 18907.2 |
| arginine abc transporter atp-binding protein artp | EC382_RS09260 | Not Available | Positive | 1957622 - 1958350 | 27023.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





