Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-cyano-7-deazaguanine synthase quec | EC382_RS09115 | Not Available | Positive | 1926261 - 1926956 | 25483.6 |
| ybgc/fadm family acyl-coa thioesterase | EC382_RS09120 | Not Available | Negative | 1927008 - 1927406 | 15098.2 |
| hypothetical protein | EC382_RS09125 | Not Available | Negative | 1927512 - 1927883 | 12704.4 |
| peptidylprolyl isomerase | EC382_RS09130 | Not Available | Negative | 1928034 - 1929905 | 68152.8 |
| dna-binding protein hu-beta | EC382_RS09135 | Not Available | Negative | 1930097 - 1930369 | 9226.08 |
| endopeptidase la | EC382_RS09140 | Not Available | Negative | 1930578 - 1932932 | 87443.4 |
| atp-dependent protease atp-binding subunit clpx | EC382_RS09145 | Not Available | Negative | 1933120 - 1934394 | 46358.7 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | EC382_RS09150 | Not Available | Negative | 1934520 - 1935143 | 23188.1 |
| trigger factor | EC382_RS09155 | Not Available | Negative | 1935389 - 1936687 | 48181.4 |
| transcriptional regulator bola | EC382_RS09160 | Not Available | Negative | 1937031 - 1937348 | 11994.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





