Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaminase a | EC382_RS08910 | Not Available | Negative | 1879442 - 1880374 | 32846.1 |
| copper-exporting p-type atpase copa | EC382_RS08915 | Not Available | Positive | 1880636 - 1883140 | 87964.4 |
| higa family addiction module antidote protein | EC382_RS08920 | Not Available | Negative | 1883355 - 1883696 | 13157.9 |
| hypothetical protein | EC382_RS08925 | Not Available | Positive | 1883834 - 1884628 | 29959.4 |
| cys-trna(pro)/cys-trna(cys) deacylase ybak | EC382_RS08930 | Not Available | Positive | 1884832 - 1885311 | 17093.9 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | EC382_RS08935 | Not Available | Negative | 1885348 - 1887000 | 60758.3 |
| mfs transporter | EC382_RS08940 | Not Available | Positive | 1887218 - 1888438 | 43312.2 |
| kef family k(+) transporter | EC382_RS08945 | Not Available | Positive | 1888676 - 1890352 | 59442.3 |
| inosine/guanosine kinase | EC382_RS08950 | Not Available | Negative | 1890482 - 1891786 | 48451.4 |
| acetyl esterase | EC382_RS08955 | Not Available | Positive | 1891938 - 1892897 | 36110.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





