Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-e crispr-associated protein cse1/casa | EC382_RS08810 | Not Available | Negative | 1854821 - 1856383 | 59094.5 |
| crispr-associated helicase/endonuclease cas3 | EC382_RS08815 | Not Available | Negative | 1856480 - 1859179 | 101848.0 |
| type i toxin-antitoxin system hok family toxin | EC382_RS08820 | Not Available | Negative | 1859372 - 1859524 | 5559.11 |
| phosphoadenosine phosphosulfate reductase | EC382_RS08825 | Not Available | Negative | 1859789 - 1860523 | 27977.3 |
| assimilatory sulfite reductase (nadph) hemoprotein subunit | EC382_RS08830 | Not Available | Negative | 1860597 - 1862309 | 63963.8 |
| nadph-dependent assimilatory sulfite reductase flavoprotein subunit | EC382_RS08835 | Not Available | Negative | 1862309 - 1864108 | 66342.4 |
| 6-carboxytetrahydropterin synthase qued | EC382_RS08840 | Not Available | Positive | 1864424 - 1864789 | 13773.6 |
| fad-dependent oxidoreductase | EC382_RS08845 | Not Available | Positive | 1864867 - 1866138 | 46294.7 |
| ferredoxin family protein | EC382_RS08850 | Not Available | Positive | 1866129 - 1866389 | 9635.44 |
| glycerol-3-phosphate responsive antiterminator | EC382_RS08855 | Not Available | Positive | 1866406 - 1866981 | 20787.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





