Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylyl-sulfate kinase | EC382_RS08760 | Not Available | Negative | 1845693 - 1846298 | 22322.7 |
| sulfate adenylyltransferase subunit cysn | EC382_RS08765 | Not Available | Negative | 1846298 - 1847725 | 52561.5 |
| sulfate adenylyltransferase subunit cysd | EC382_RS08770 | Not Available | Negative | 1847727 - 1848635 | 35205.3 |
| alkaline phosphatase isozyme conversion aminopeptidase | EC382_RS08775 | Not Available | Positive | 1848887 - 1849924 | 37913.4 |
| type i-e crispr-associated endoribonuclease cas2 | EC382_RS08780 | Not Available | Negative | 1850619 - 1850912 | 11004.4 |
| type i-e crispr-associated endonuclease cas1 | EC382_RS08785 | Not Available | Negative | 1850909 - 1851832 | 33442.7 |
| type i-e crispr-associated protein cas6/cse3/case | EC382_RS08790 | Not Available | Negative | 1851829 - 1852479 | 24887.9 |
| type i-e crispr-associated protein cas5/casd | EC382_RS08795 | Not Available | Negative | 1852461 - 1853207 | 28626.0 |
| type i-e crispr-associated protein cas7/cse4/casc | EC382_RS08800 | Not Available | Negative | 1853218 - 1854273 | 38372.6 |
| type i-e crispr-associated protein cse2/casb | EC382_RS08805 | Not Available | Negative | 1854288 - 1854824 | 20629.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





