Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | EC382_RS08710 | Not Available | Positive | 1838338 - 1838745 | 15441.8 |
| rna polymerase sigma factor rpos | EC382_RS08715 | Not Available | Negative | 1838865 - 1839857 | 37975.1 |
| murein hydrolase activator nlpd | EC382_RS08720 | Not Available | Negative | 1839920 - 1841059 | 40151.3 |
| protein-l-isoaspartate o-methyltransferase | EC382_RS08725 | Not Available | Negative | 1841199 - 1841825 | 23259.2 |
| 5'/3'-nucleotidase sure | EC382_RS08730 | Not Available | Negative | 1841819 - 1842580 | 26916.0 |
| trna pseudouridine(13) synthase trud | EC382_RS08735 | Not Available | Negative | 1842561 - 1843610 | 39136.8 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | EC382_RS08740 | Not Available | Negative | 1843607 - 1844086 | 16898.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | EC382_RS08745 | Not Available | Negative | 1844086 - 1844796 | 25738.7 |
| cell division protein ftsb | EC382_RS08750 | Not Available | Negative | 1844815 - 1845126 | 11622.7 |
| duf3561 family protein | EC382_RS08755 | Not Available | Negative | 1845320 - 1845643 | 12050.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





