Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit hycg | EC382_RS08610 | Not Available | Negative | 1818444 - 1819211 | 28014.8 |
| formate hydrogenlyase subunit hycf | EC382_RS08615 | Not Available | Negative | 1819211 - 1819753 | 20329.4 |
| hydrogenase large subunit | EC382_RS08620 | Not Available | Negative | 1819763 - 1821472 | 64984.1 |
| formate hydrogenlyase subunit hycd | EC382_RS08625 | Not Available | Negative | 1821490 - 1822413 | 33031.4 |
| formate hydrogenlyase subunit 3 | EC382_RS08630 | Not Available | Negative | 1822416 - 1824242 | 64127.2 |
| 4fe-4s dicluster domain-containing protein | EC382_RS08635 | Not Available | Negative | 1824239 - 1824850 | 21874.4 |
| formate hydrogenlyase regulator hyca | EC382_RS08640 | Not Available | Negative | 1824975 - 1825436 | 17627.9 |
| hydrogenase maturation nickel metallochaperone hypa | EC382_RS08645 | Not Available | Positive | 1825648 - 1825998 | 13168.9 |
| hydrogenase nickel incorporation protein hypb | EC382_RS08650 | Not Available | Positive | 1826002 - 1826874 | 31596.9 |
| hydrogenase 3 maturation protein hypc | EC382_RS08655 | Not Available | Positive | 1826865 - 1827137 | 9732.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





