Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcin c abc transporter permease yejb | EC382_RS08410 | Not Available | Positive | 1775689 - 1776783 | 40362.6 |
| abc transporter permease | EC382_RS08415 | Not Available | Positive | 1776783 - 1777808 | 38094.6 |
| microcin c abc transporter atp-binding protein yejf | EC382_RS08420 | Not Available | Positive | 1777810 - 1779399 | 58667.7 |
| hypothetical protein | EC382_RS08425 | Not Available | Negative | 1779403 - 1779747 | 12525.9 |
| multidrug efflux mfs transporter bcr | EC382_RS08430 | Not Available | Negative | 1780080 - 1781270 | 43355.4 |
| 16s rrna pseudouridine(516) synthase rsua | EC382_RS08435 | Not Available | Negative | 1781298 - 1781993 | 25866.8 |
| dead/deah box helicase | EC382_RS08440 | Not Available | Positive | 1782142 - 1783902 | 66604.0 |
| 50s ribosomal protein l25 | EC382_RS08445 | Not Available | Positive | 1784027 - 1784311 | 10694.0 |
| nucleoid-associated protein yejk | EC382_RS08450 | Not Available | Negative | 1784450 - 1785457 | 37825.6 |
| yejl family protein | EC382_RS08455 | Not Available | Positive | 1785639 - 1785866 | 8288.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





