Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic acid/h+ symport family mfs transporter | EC382_RS08210 | Not Available | Negative | 1729677 - 1731035 | 48432.7 |
| lysr family transcriptional regulator | EC382_RS08215 | Not Available | Positive | 1731162 - 1732070 | 33802.3 |
| cida/lrga family protein | EC382_RS08220 | Not Available | Positive | 1732201 - 1732599 | 14593.6 |
| cidb/lrgb family autolysis modulator | EC382_RS08225 | Not Available | Positive | 1732596 - 1733291 | 24489.1 |
| cytidine deaminase | EC382_RS08230 | Not Available | Positive | 1733421 - 1734305 | 31555.6 |
| outer membrane permeability protein sana | EC382_RS08235 | Not Available | Positive | 1734455 - 1735174 | 27288.5 |
| duf2542 family protein | EC382_RS08240 | Not Available | Positive | 1735177 - 1735416 | 9264.61 |
| nad(p)-dependent oxidoreductase | EC382_RS08245 | Not Available | Positive | 1735610 - 1736848 | 44367.2 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | EC382_RS08250 | Not Available | Positive | 1736842 - 1738077 | 45071.4 |
| galactose/methyl galactoside abc transporter permease mglc | EC382_RS08255 | Not Available | Negative | 1738320 - 1739330 | 35552.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





