Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine--trna ligase | EC382_RS07705 | Not Available | Positive | 1618999 - 1621581 | 97270.0 |
| lps assembly lipoprotein lpte | EC382_RS07710 | Not Available | Positive | 1621596 - 1622177 | 21357.8 |
| dna polymerase iii subunit delta | EC382_RS07715 | Not Available | Positive | 1622177 - 1623208 | 38702.0 |
| nicotinate-nucleotide adenylyltransferase | EC382_RS07720 | Not Available | Positive | 1623210 - 1623851 | 24515.3 |
| adenosylcobalamin/alpha-ribazole phosphatase | EC382_RS07725 | Not Available | Positive | 1623875 - 1624486 | 23386.8 |
| ribosome silencing factor | EC382_RS07730 | Not Available | Positive | 1624746 - 1625063 | 11582.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | EC382_RS07735 | Not Available | Positive | 1625067 - 1625534 | 17342.1 |
| peptidoglycan dd-transpeptidase mrda | EC382_RS07740 | Not Available | Positive | 1625565 - 1627466 | 70860.6 |
| peptidoglycan glycosyltransferase mrdb | EC382_RS07745 | Not Available | Positive | 1627469 - 1628581 | 40478.6 |
| endolytic peptidoglycan transglycosylase rlpa | EC382_RS07750 | Not Available | Positive | 1628592 - 1629680 | 37574.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





