Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate/aspartate abc transporter atp binding protein gltl | EC382_RS07655 | Not Available | Positive | 1608526 - 1609251 | 26662.7 |
| pyrimidine-specific ribonucleoside hydrolase riha | EC382_RS07660 | Not Available | Positive | 1609369 - 1610304 | 33810.9 |
| molecular chaperone hscc | EC382_RS07665 | Not Available | Positive | 1610388 - 1612058 | 62007.9 |
| co-chaperone djlc | EC382_RS07670 | Not Available | Negative | 1612118 - 1613569 | 55565.9 |
| duf1266 domain-containing protein | EC382_RS07675 | Not Available | Negative | 1613566 - 1614273 | 27005.8 |
| sel1 repeat family protein | EC382_RS07680 | Not Available | Positive | 1614375 - 1614929 | 20885.9 |
| j domain-containing protein | EC382_RS07685 | Not Available | Negative | 1614939 - 1616366 | 55080.2 |
| duf1266 domain-containing protein | EC382_RS07690 | Not Available | Negative | 1616363 - 1617070 | 27689.5 |
| sel1-like repeat protein | EC382_RS07695 | Not Available | Positive | 1617234 - 1618211 | 37090.7 |
| zinc ribbon-containing protein | EC382_RS07700 | Not Available | Negative | 1618281 - 1618763 | 18798.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





