Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoleucine--trna ligase | EC382_RS07355 | Not Available | Negative | 1543009 - 1545825 | 104242.0 |
| bifunctional riboflavin kinase/fad synthetase | EC382_RS07360 | Not Available | Negative | 1545868 - 1546809 | 34736.4 |
| duf2575 domain-containing protein | EC382_RS07365 | Not Available | Negative | 1546817 - 1547035 | 7890.84 |
| 30s ribosomal protein s20 | EC382_RS07370 | Not Available | Positive | 1547138 - 1547401 | 9684.94 |
| type iii secretion system effector espx1 | EC382_RS07375 | Not Available | Positive | 1547885 - 1549306 | 55758.0 |
| fimbrial protein | EC382_RS07380 | Not Available | Positive | 1549608 - 1550141 | 19128.5 |
| fimbria/pilus periplasmic chaperone | EC382_RS07385 | Not Available | Positive | 1550191 - 1550874 | 25375.9 |
| fimbrial biogenesis outer membrane usher protein | EC382_RS07390 | Not Available | Positive | 1550887 - 1553337 | 92073.6 |
| fimbrial family protein | EC382_RS07395 | Not Available | Positive | 1553350 - 1554309 | 35853.4 |
| transcriptional activator nhar | EC382_RS07400 | Not Available | Negative | 1554347 - 1555246 | 34068.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





