Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonobetainyl-coa hydratase | EC382_RS07305 | Not Available | Positive | 1532059 - 1532844 | 28178.8 |
| carnitine operon protein caie | EC382_RS07310 | Not Available | Positive | 1532850 - 1533440 | 21141.6 |
| carnitine metabolism transcriptional regulator caif | EC382_RS07315 | Not Available | Negative | 1533559 - 1533954 | 15437.1 |
| carbamoyl-phosphate synthase large subunit | EC382_RS07320 | Not Available | Negative | 1534215 - 1537436 | 117863.0 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | EC382_RS07325 | Not Available | Negative | 1537454 - 1538602 | 41389.4 |
| 4-hydroxy-tetrahydrodipicolinate reductase | EC382_RS07330 | Not Available | Negative | 1539058 - 1539879 | 28781.4 |
| ribonucleoside hydrolase rihc | EC382_RS07335 | Not Available | Negative | 1540046 - 1540960 | 32568.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | EC382_RS07340 | Not Available | Negative | 1541026 - 1541976 | 34776.6 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | EC382_RS07345 | Not Available | Negative | 1541978 - 1542427 | 16081.9 |
| lipoprotein signal peptidase | EC382_RS07350 | Not Available | Negative | 1542515 - 1543009 | 18129.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





