Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps assembly protein lptd | EC382_RS07205 | Not Available | Positive | 1510546 - 1512900 | 89675.8 |
| peptidylprolyl isomerase sura | EC382_RS07210 | Not Available | Positive | 1512953 - 1514239 | 47286.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | EC382_RS07215 | Not Available | Positive | 1514239 - 1515228 | 35121.8 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | EC382_RS07220 | Not Available | Positive | 1515225 - 1516046 | 30422.0 |
| co2+/mg2+ efflux protein apag | EC382_RS07225 | Not Available | Positive | 1516049 - 1516426 | 13867.6 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | EC382_RS07230 | Not Available | Positive | 1516433 - 1517281 | 31498.6 |
| plasmid maintenance protein ccdb | EC382_RS07235 | Not Available | Negative | 1517278 - 1517592 | 11712.5 |
| antitoxin | EC382_RS07240 | Not Available | Negative | 1517595 - 1517828 | 8530.97 |
| type 3 dihydrofolate reductase | EC382_RS07245 | Not Available | Negative | 1517914 - 1518393 | 17974.3 |
| glutathione-regulated potassium-efflux system protein kefc | EC382_RS07250 | Not Available | Negative | 1518585 - 1520447 | 67710.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





