Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine abc transporter atp-binding protein thiq | EC382_RS07155 | Not Available | Positive | 1496262 - 1496960 | 25040.7 |
| deda family protein | EC382_RS07160 | Not Available | Negative | 1497047 - 1497811 | 28213.8 |
| arabinose operon transcriptional regulator arac | EC382_RS07165 | Not Available | Negative | 1497897 - 1498775 | 33385.8 |
| ribulokinase | EC382_RS07170 | Not Available | Positive | 1499114 - 1500814 | 61150.7 |
| l-arabinose isomerase | EC382_RS07175 | Not Available | Positive | 1500825 - 1502327 | 56078.1 |
| l-ribulose-5-phosphate 4-epimerase | EC382_RS07180 | Not Available | Positive | 1502496 - 1503191 | 25534.4 |
| dna polymerase ii | EC382_RS07185 | Not Available | Positive | 1503266 - 1505617 | 90056.7 |
| rna polymerase-associated protein rapa | EC382_RS07190 | Not Available | Positive | 1505781 - 1508687 | 109791.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | EC382_RS07195 | Not Available | Positive | 1508699 - 1509358 | 24862.1 |
| co-chaperone djla | EC382_RS07200 | Not Available | Negative | 1509476 - 1510291 | 30655.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





