Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | EC382_RS07105 | Not Available | Positive | 1484260 - 1485693 | 52175.7 |
| protein ygjj | EC382_RS07110 | Not Available | Positive | 1485827 - 1486897 | 40078.5 |
| alpha-glucosidase | EC382_RS07115 | Not Available | Positive | 1486914 - 1489265 | 88310.6 |
| 3-isopropylmalate dehydratase large subunit | EC382_RS07120 | Not Available | Positive | 1489383 - 1489937 | 19382.1 |
| 3-isopropylmalate dehydratase small subunit | EC382_RS07125 | Not Available | Positive | 1489948 - 1490553 | 22530.8 |
| glucose uptake inhibitor sgrt | EC382_RS07130 | Not Available | Negative | 1490661 - 1490792 | 5382.47 |
| hth-type transcriptional regulator sgrr | EC382_RS07135 | Not Available | Positive | 1490881 - 1492539 | 64320.2 |
| t3ss effector espy2 | EC382_RS07140 | Not Available | Negative | 1492768 - 1493337 | 21599.5 |
| thiamine abc transporter substrate binding subunit | EC382_RS07145 | Not Available | Positive | 1493709 - 1494692 | 36165.2 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | EC382_RS07150 | Not Available | Positive | 1494668 - 1496278 | 59265.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





