Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| g/u mismatch-specific dna glycosylase | EC382_RS07055 | Not Available | Negative | 1473040 - 1473546 | 18674.5 |
| Trna-met | Not Available | Not Available | Positive | 1473671 - 1473746 | Not Available |
| nadph-dependent ferric chelate reductase | EC382_RS07065 | Not Available | Negative | 1473800 - 1474564 | 28961.1 |
| padr family transcriptional regulator | EC382_RS07070 | Not Available | Positive | 1474852 - 1475475 | 23416.7 |
| methyl-accepting chemotaxis protein | EC382_RS07075 | Not Available | Negative | 1475582 - 1477102 | 55116.0 |
| putrescine aminotransferase | EC382_RS07080 | Not Available | Positive | 1477409 - 1478899 | 53855.5 |
| pp_01407 | EC382_RS07085 | Not Available | Negative | 1478941 - 1479273 | Not Available |
| transcriptional regulator ebgr | EC382_RS07090 | Not Available | Positive | 1479492 - 1480475 | 36242.5 |
| beta-galactosidase subunit alpha | EC382_RS07095 | Not Available | Positive | 1480659 - 1483751 | 117885.0 |
| beta-galactosidase subunit beta | EC382_RS07100 | Not Available | Positive | 1483748 - 1484197 | 17457.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





