Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | EC382_RS07005 | Not Available | Negative | 1462293 - 1462661 | 13620.2 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | EC382_RS07010 | Not Available | Positive | 1462766 - 1463383 | 22194.7 |
| dna-binding transcriptional activator ttdr | EC382_RS07015 | Not Available | Negative | 1463396 - 1464328 | 35316.6 |
| l(+)-tartrate dehydratase subunit alpha | EC382_RS07020 | Not Available | Positive | 1464535 - 1465446 | 32650.4 |
| l(+)-tartrate dehydratase subunit beta | EC382_RS07025 | Not Available | Positive | 1465443 - 1466048 | 22680.8 |
| anion permease | EC382_RS07030 | Not Available | Positive | 1466097 - 1467560 | 52914.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | EC382_RS07035 | Not Available | Negative | 1467603 - 1468616 | 36108.6 |
| 30s ribosomal protein s21 | EC382_RS07040 | Not Available | Positive | 1468854 - 1469069 | 8500.42 |
| dna primase | EC382_RS07045 | Not Available | Positive | 1469180 - 1470925 | 65568.5 |
| rna polymerase sigma factor rpod | EC382_RS07050 | Not Available | Positive | 1471120 - 1472961 | 70211.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





