Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Phage transposase | EC382_RS06565 | Not Available | Negative | 1370272 - 1372359 | 79789.2 |
| Ner | EC382_RS06570 | Not Available | Negative | 1372362 - 1372592 | 8694.52 |
| Putative ci repressor | EC382_RS06575 | Not Available | Positive | 1372778 - 1373008 | 8532.28 |
| Tail component | EC382_RS09975 | Not Available | Negative | 2109972 - 2110983 | 35610.3 |
| Tail component | EC382_RS09980 | Not Available | Negative | 2110976 - 2111410 | 16092.0 |
| Tail component | EC382_RS09985 | Not Available | Negative | 2111392 - 2111814 | 15608.4 |
| Major tail protein v | EC382_RS09990 | Not Available | Negative | 2111830 - 2112570 | 25838.2 |
| Tail component | EC382_RS09995 | Not Available | Negative | 2112578 - 2112973 | 14649.9 |
| Tail component | EC382_RS10000 | Not Available | Negative | 2112970 - 2113548 | 21588.1 |
| Head-tail joining protein | EC382_RS10005 | Not Available | Negative | 2113560 - 2113913 | 12779.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





