Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yqij family protein | EC382_RS06955 | Not Available | Positive | 1450280 - 1450909 | 23088.5 |
| flotillin family protein | EC382_RS06960 | Not Available | Positive | 1450936 - 1452597 | 60661.1 |
| type i toxin-antitoxin system ibs family toxin | EC382_RS06965 | Not Available | Positive | 1452836 - 1452895 | 2150.99 |
| type i toxin-antitoxin system toxin ibse | EC382_RS06970 | Not Available | Positive | 1453212 - 1453271 | 2207.06 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | EC382_RS06975 | Not Available | Negative | 1453391 - 1454824 | 51068.6 |
| bifunctional | EC382_RS06980 | Not Available | Negative | 1454872 - 1457712 | 108449.0 |
| inorganic triphosphatase | EC382_RS06985 | Not Available | Negative | 1457735 - 1459036 | 48511.8 |
| sh3 domain-containing protein | EC382_RS06990 | Not Available | Positive | 1459278 - 1459898 | 23077.7 |
| fused trna nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase cca | EC382_RS06995 | Not Available | Positive | 1459962 - 1461200 | 46497.8 |
| undecaprenyl-diphosphate phosphatase | EC382_RS07000 | Not Available | Negative | 1461381 - 1462202 | 29774.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





