Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-ribose diphosphatase | EC382_RS06905 | Not Available | Negative | 1441918 - 1442547 | 23696.2 |
| outer membrane channel protein tolc | EC382_RS06910 | Not Available | Positive | 1442752 - 1444233 | 53743.7 |
| duf1190 family protein | EC382_RS06915 | Not Available | Positive | 1444381 - 1445052 | 23480.7 |
| glutathionylspermidine synthase family protein | EC382_RS06920 | Not Available | Positive | 1445058 - 1446218 | 45028.4 |
| 4,5-dopa dioxygenase extradiol | EC382_RS06925 | Not Available | Negative | 1446256 - 1447071 | 29800.8 |
| zinc transporter zupt | EC382_RS06930 | Not Available | Positive | 1447187 - 1447960 | 26486.5 |
| hypothetical protein | EC382_RS06935 | Not Available | Negative | 1448018 - 1448188 | 6838.37 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | EC382_RS06940 | Not Available | Negative | 1448450 - 1449103 | 23354.9 |
| accessory factor ubik family protein | EC382_RS06945 | Not Available | Positive | 1449477 - 1449776 | 11415.8 |
| cell surface composition regulator glgs | EC382_RS06950 | Not Available | Negative | 1449811 - 1450011 | 7922.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





