Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | EC382_RS06805 | Not Available | Positive | 1420877 - 1422040 | 42099.4 |
| 2,5-didehydrogluconate reductase dkga | EC382_RS06810 | Not Available | Positive | 1422145 - 1422972 | 31111.4 |
| ybjp/yqhg family protein | EC382_RS06815 | Not Available | Positive | 1423172 - 1424098 | 35028.1 |
| lipoprotein yqhh | EC382_RS06820 | Not Available | Positive | 1424147 - 1424404 | 9499.55 |
| ygiq family radical sam protein | EC382_RS06825 | Not Available | Negative | 1424447 - 1426666 | 83424.4 |
| cell division protein ftsp | EC382_RS06830 | Not Available | Negative | 1426777 - 1428189 | 51834.1 |
| 1-acylglycerol-3-phosphate o-acyltransferase | EC382_RS06835 | Not Available | Negative | 1428264 - 1429001 | 27424.7 |
| dna topoisomerase iv subunit a | EC382_RS06840 | Not Available | Negative | 1429235 - 1431493 | 83862.4 |
| abc transporter substrate-binding protein | EC382_RS06845 | Not Available | Negative | 1431631 - 1433238 | 60769.2 |
| transcriptional regulator | EC382_RS06850 | Not Available | Negative | 1433347 - 1433829 | 17842.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





