Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2623 domain-containing protein | EC382_RS06755 | Not Available | Negative | 1411969 - 1412256 | 10946.1 |
| dienelactone hydrolase family protein | EC382_RS06760 | Not Available | Negative | 1412375 - 1413262 | 32584.6 |
| l-glyceraldehyde 3-phosphate reductase | EC382_RS06765 | Not Available | Positive | 1413419 - 1414459 | 38817.3 |
| tigr00645 family protein | EC382_RS06770 | Not Available | Negative | 1414499 - 1414993 | 18642.3 |
| nadp(+)-dependent aldehyde reductase | EC382_RS06775 | Not Available | Positive | 1415184 - 1416068 | 31545.8 |
| tonb system transport protein exbd | EC382_RS06780 | Not Available | Negative | 1416340 - 1416765 | 15527.9 |
| biopolymer transporter exbb | EC382_RS06785 | Not Available | Negative | 1416772 - 1417506 | 26289.0 |
| cystathionine beta-lyase | EC382_RS06790 | Not Available | Positive | 1417758 - 1418945 | 43219.8 |
| deda family protein | EC382_RS06795 | Not Available | Positive | 1419085 - 1419744 | 24135.3 |
| arac family transcriptional regulator | EC382_RS06800 | Not Available | Negative | 1419784 - 1420683 | 33817.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





