Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional glutathionylspermidine amidase/synthase | EC382_RS06705 | Not Available | Negative | 1402182 - 1404041 | 70535.8 |
| glutathione-dependent disulfide-bond oxidoreductase | EC382_RS06710 | Not Available | Positive | 1404246 - 1405112 | 32425.4 |
| hydrogenase maturation factor hybg | EC382_RS06715 | Not Available | Negative | 1405235 - 1405483 | 8808.67 |
| hydrogenase maturation nickel metallochaperone hypa | EC382_RS06720 | Not Available | Negative | 1405496 - 1405837 | 12712.2 |
| hydrogenase-2 assembly chaperone | EC382_RS06725 | Not Available | Negative | 1405830 - 1406318 | 17990.7 |
| hyad/hybd family hydrogenase maturation endopeptidase | EC382_RS06730 | Not Available | Negative | 1406311 - 1406805 | 17724.8 |
| hydrogenase 2 large subunit | EC382_RS06735 | Not Available | Negative | 1406805 - 1408508 | 62494.6 |
| ni/fe-hydrogenase cytochrome b subunit | EC382_RS06740 | Not Available | Negative | 1408505 - 1409683 | 43604.7 |
| hydrogenase 2 operon protein hyba | EC382_RS06745 | Not Available | Negative | 1409673 - 1410659 | 36005.0 |
| hydrogenase 2 small subunit | EC382_RS06750 | Not Available | Negative | 1410662 - 1411780 | 39668.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





