Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate synthase g | EC382_RS06605 | Not Available | Negative | 1379971 - 1382142 | 80435.1 |
| protein glcg | EC382_RS06610 | Not Available | Negative | 1382164 - 1382568 | 13737.5 |
| glycolate oxidase subunit glcf | EC382_RS06615 | Not Available | Negative | 1382573 - 1383796 | 45085.7 |
| glycolate oxidase subunit glce | EC382_RS06620 | Not Available | Negative | 1383807 - 1384859 | 38277.1 |
| glycolate oxidase subunit glcd | EC382_RS06625 | Not Available | Negative | 1384859 - 1386358 | 53756.9 |
| transcriptional regulator glcc | EC382_RS06630 | Not Available | Positive | 1386609 - 1387373 | 28843.9 |
| n-acetyltransferase | EC382_RS06635 | Not Available | Negative | 1387380 - 1388522 | 43519.9 |
| fatty acyl-amp ligase | EC382_RS06640 | Not Available | Positive | 1388877 - 1390607 | 63562.1 |
| nad-dependent epimerase/dehydratase family protein | EC382_RS06645 | Not Available | Positive | 1390622 - 1391518 | 32860.4 |
| acyl carrier protein | EC382_RS06650 | Not Available | Positive | 1391550 - 1391798 | 9417.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





