Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix transcriptional regulator | EC382_RS05955 | Not Available | Negative | 1256198 - 1256578 | 14094.0 |
| nad(p)h:quinone oxidoreductase | EC382_RS05960 | Not Available | Positive | 1256667 - 1257527 | 29797.2 |
| dmt family transporter | EC382_RS05965 | Not Available | Positive | 1257635 - 1258600 | 35263.6 |
| iron-sulfur cluster repair protein ytfe | EC382_RS05970 | Not Available | Positive | 1258708 - 1259370 | 24897.1 |
| d-serine/d-alanine/glycine transporter | EC382_RS05975 | Not Available | Negative | 1259415 - 1260827 | 51662.6 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | EC382_RS05980 | Not Available | Negative | 1261136 - 1261756 | 22217.5 |
| cell division protein ytfb | EC382_RS05985 | Not Available | Positive | 1261975 - 1262613 | 23506.9 |
| t3ss effector pentapeptide repeat protein espx5 | EC382_RS05990 | Not Available | Positive | 1262704 - 1263800 | 41667.8 |
| na+/h+ antiporter | EC382_RS05995 | Not Available | Negative | 1263954 - 1265603 | 60527.5 |
| ncs2 family permease | EC382_RS06000 | Not Available | Negative | 1265754 - 1267103 | 45714.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





