Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts trehalose transporter subunit iibc | EC382_RS05550 | Not Available | Positive | 1187026 - 1188447 | 51105.0 |
| alpha,alpha-phosphotrehalase | EC382_RS05555 | Not Available | Positive | 1188497 - 1190152 | 63908.1 |
| anaerobic ribonucleoside-triphosphate reductase | EC382_RS05560 | Not Available | Positive | 1190546 - 1192684 | 80027.0 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | EC382_RS05565 | Not Available | Positive | 1192874 - 1193338 | 17446.9 |
| cytochrome b562 | EC382_RS05570 | Not Available | Negative | 1193383 - 1193769 | 14047.7 |
| metalloprotease pmba | EC382_RS05575 | Not Available | Negative | 1193953 - 1195305 | 48372.4 |
| ribosome-associated protein | EC382_RS05580 | Not Available | Positive | 1195399 - 1195950 | 21360.5 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | EC382_RS05585 | Not Available | Negative | 1196106 - 1197479 | 49882.0 |
| class 1 fructose-bisphosphatase | EC382_RS05590 | Not Available | Positive | 1197655 - 1198653 | 36836.0 |
| sugar abc transporter permease yjff | EC382_RS05595 | Not Available | Negative | 1198686 - 1199681 | 35036.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





