Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter permease lptf | EC382_RS05450 | Not Available | Negative | 1165780 - 1166880 | 40360.1 |
| leucyl aminopeptidase | EC382_RS05455 | Not Available | Positive | 1167147 - 1168658 | 54883.1 |
| dna polymerase iii subunit chi | EC382_RS05460 | Not Available | Positive | 1169012 - 1169455 | 16613.6 |
| valine--trna ligase | EC382_RS05465 | Not Available | Positive | 1169455 - 1172310 | 108199.0 |
| duf898 domain-containing protein | EC382_RS05470 | Not Available | Negative | 1172366 - 1173562 | 44967.2 |
| gnat family n-acetyltransferase | EC382_RS05475 | Not Available | Positive | 1173755 - 1174258 | 18621.5 |
| ribonuclease e inhibitor rrab | EC382_RS05480 | Not Available | Negative | 1174304 - 1174720 | 15603.5 |
| ornithine carbamoyltransferase | EC382_RS05485 | Not Available | Positive | 1174882 - 1175886 | 36851.1 |
| hypothetical protein | EC382_RS05490 | Not Available | Negative | 1175943 - 1177769 | 70221.4 |
| duf386 domain-containing protein | EC382_RS05495 | Not Available | Negative | 1177892 - 1178344 | 16924.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





