Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 1125279 - 1125366 | Not Available |
| glyoxylate/hydroxypyruvate reductase ghra | EC382_RS05250 | Not Available | Positive | 1125600 - 1126538 | 35345.4 |
| phosphatase | EC382_RS05255 | Not Available | Positive | 1126593 - 1127330 | 26848.0 |
| molecular chaperone | EC382_RS05260 | Not Available | Positive | 1127354 - 1127908 | 20783.4 |
| duf1097 domain-containing protein | EC382_RS05265 | Not Available | Positive | 1128010 - 1128501 | 17105.5 |
| curli production assembly/transport protein csgg | EC382_RS05270 | Not Available | Negative | 1128565 - 1129398 | 30559.0 |
| curli production assembly/transport protein csgf | EC382_RS05275 | Not Available | Negative | 1129425 - 1129841 | 15072.7 |
| curli production assembly/transport protein csge | EC382_RS05280 | Not Available | Negative | 1129866 - 1130255 | 14937.6 |
| transcriptional regulator csgd | EC382_RS05285 | Not Available | Negative | 1130260 - 1130910 | 24911.9 |
| curlin minor subunit csgb | EC382_RS05290 | Not Available | Positive | 1131663 - 1132118 | 15882.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





