Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | EC382_RS05095 | Not Available | Negative | 1085611 - 1087629 | 77356.9 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | EC382_RS05100 | Not Available | Negative | 1087638 - 1090061 | 92371.0 |
| ggdef domain-containing protein | EC382_RS05105 | Not Available | Positive | 1090650 - 1092008 | 51732.5 |
| eal domain-containing protein | EC382_RS05110 | Not Available | Positive | 1092106 - 1093716 | 60867.3 |
| fidl | EC382_RS05115 | Not Available | Negative | 1093818 - 1094309 | 19014.6 |
| transcriptional regulator | EC382_RS05120 | Not Available | Negative | 1094314 - 1095126 | 30973.5 |
| sdr family oxidoreductase | EC382_RS05125 | Not Available | Positive | 1095814 - 1096596 | 28596.6 |
| molecular chaperone | EC382_RS05130 | Not Available | Negative | 1096742 - 1097431 | 25764.9 |
| fimbrial protein | EC382_RS05135 | Not Available | Negative | 1097428 - 1098762 | 46732.8 |
| fimbrial biogenesis outer membrane usher protein | EC382_RS05140 | Not Available | Negative | 1098778 - 1101300 | 91162.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





