Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | EC382_RS05045 | Not Available | Negative | 1070549 - 1074511 | 143810.0 |
| hypothetical protein | EC382_RS05050 | Not Available | Positive | 1074566 - 1074775 | 7779.91 |
| sodium/proline symporter putp | EC382_RS05055 | Not Available | Positive | 1074934 - 1076442 | 54317.3 |
| hypothetical protein | EC382_RS05060 | Not Available | Negative | 1076591 - 1077934 | 50727.8 |
| ftr1 family protein | EC382_RS05065 | Not Available | Positive | 1079116 - 1079946 | 30345.7 |
| iron uptake system protein efeo | EC382_RS05070 | Not Available | Positive | 1080004 - 1081131 | 41167.9 |
| deferrochelatase/peroxidase efeb | EC382_RS05075 | Not Available | Positive | 1081137 - 1082408 | 46667.8 |
| phosphate starvation-inducible protein phoh | EC382_RS05080 | Not Available | Positive | 1082764 - 1083828 | 39297.1 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | EC382_RS05085 | Not Available | Negative | 1083878 - 1084291 | 16082.7 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | EC382_RS05090 | Not Available | Negative | 1084293 - 1085618 | 50768.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





