Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h:quinone oxidoreductase | EC382_RS04995 | Not Available | Negative | 1062915 - 1063511 | 20846.8 |
| general stress protein | EC382_RS05000 | Not Available | Positive | 1063884 - 1064057 | 5883.55 |
| pyrimidine utilization transport protein g | EC382_RS05005 | Not Available | Negative | 1064140 - 1065468 | 45540.4 |
| pyrimidine utilization flavin reductase protein f | EC382_RS05010 | Not Available | Negative | 1065489 - 1065983 | 17778.3 |
| malonic semialdehyde reductase | EC382_RS05015 | Not Available | Negative | 1065994 - 1066584 | 21551.5 |
| pyrimidine utilization protein d | EC382_RS05020 | Not Available | Negative | 1066594 - 1067394 | 28930.8 |
| pyrimidine utilization protein c | EC382_RS05025 | Not Available | Negative | 1067402 - 1067788 | 13763.6 |
| peroxyureidoacrylate/ureidoacrylate amidohydrolase rutb | EC382_RS05030 | Not Available | Negative | 1067800 - 1068492 | 25258.1 |
| pyrimidine utilization protein a | EC382_RS05035 | Not Available | Negative | 1068492 - 1069583 | 40021.6 |
| hth-type transcriptional regulator rutr | EC382_RS05040 | Not Available | Positive | 1069871 - 1070509 | 23688.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





