Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsule biosynthesis gfcc family protein | EC382_RS04895 | Not Available | Negative | 1044589 - 1045335 | 27225.5 |
| yjbf family lipoprotein | EC382_RS04900 | Not Available | Negative | 1045332 - 1045976 | 24249.9 |
| threonine-rich inner membrane protein gfca | EC382_RS04905 | Not Available | Negative | 1046083 - 1046388 | 9447.98 |
| cold shock-like protein csph | EC382_RS04910 | Not Available | Negative | 1046830 - 1047042 | 7720.48 |
| cold shock protein cspg | EC382_RS04915 | Not Available | Positive | 1047328 - 1047540 | 7781.14 |
| cold-shock protein | EC382_RS04920 | Not Available | Positive | 1047551 - 1047739 | 7104.55 |
| protein ymce | EC382_RS04925 | Not Available | Positive | 1047714 - 1047944 | 8668.48 |
| addiction module toxin, gnsa/gnsb family | EC382_RS04930 | Not Available | Positive | 1047934 - 1048107 | 6575.99 |
| 4fe-4s binding protein | EC382_RS04935 | Not Available | Negative | 1048155 - 1049228 | 40115.4 |
| tmao reductase system sensor histidine kinase/response regulator tors | EC382_RS04940 | Not Available | Negative | 1049300 - 1052044 | 100870.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





