Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-1 operon protein hyae | EC382_RS04845 | Not Available | Positive | 1032987 - 1033385 | 14950.7 |
| hydrogenase expression/formation protein | EC382_RS04850 | Not Available | Positive | 1033382 - 1034239 | 31418.5 |
| cytochrome bd-ii oxidase subunit 1 | EC382_RS04855 | Not Available | Positive | 1034373 - 1035917 | 58012.3 |
| cytochrome d ubiquinol oxidase subunit ii | EC382_RS04860 | Not Available | Positive | 1035929 - 1037065 | 42399.3 |
| cytochrome bd-ii oxidase subunit cbdx | EC382_RS04865 | Not Available | Positive | 1037078 - 1037170 | 3597.68 |
| appa family phytase/histidine-type acid phosphatase | EC382_RS04870 | Not Available | Positive | 1037250 - 1038554 | 47274.7 |
| tyrosine-protein kinase | EC382_RS04875 | Not Available | Negative | 1038674 - 1040854 | 81264.5 |
| protein-tyrosine-phosphatase etp | EC382_RS04880 | Not Available | Negative | 1040874 - 1041320 | 16386.9 |
| polysaccharide export protein | EC382_RS04885 | Not Available | Negative | 1041308 - 1042447 | 41755.2 |
| yjbh domain-containing protein | EC382_RS04890 | Not Available | Negative | 1042493 - 1044589 | 78675.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





