Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | EC382_RS04795 | Not Available | Positive | 1024052 - 1025536 | 54956.0 |
| tail fiber assembly protein | EC382_RS04800 | Not Available | Negative | 1025720 - 1026025 | 11649.9 |
| class i sam-dependent methyltransferase | EC382_RS04805 | Not Available | Positive | 1026082 - 1026750 | 24545.5 |
| tail fiber assembly protein | EC382_RS04810 | Not Available | Negative | 1026805 - 1027389 | 21743.4 |
| ykgj family cysteine cluster protein | EC382_RS04815 | Not Available | Negative | 1027789 - 1028118 | 11866.1 |
| Trna-ser | Not Available | Not Available | Positive | 1028259 - 1028346 | Not Available |
| hydrogenase 1 small subunit | EC382_RS04825 | Not Available | Positive | 1028772 - 1029890 | 40683.6 |
| ni/fe-hydrogenase large subunit | EC382_RS04830 | Not Available | Positive | 1029887 - 1031680 | 66286.1 |
| ni/fe-hydrogenase b-type cytochrome subunit | EC382_RS04835 | Not Available | Positive | 1031699 - 1032406 | 27598.8 |
| hydrogenase 1 maturation protease | EC382_RS04840 | Not Available | Positive | 1032403 - 1032990 | 21518.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





