Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | EC382_RS04695 | Not Available | Negative | 1002160 - 1003092 | 35017.7 |
| endonuclease smrb | EC382_RS04700 | Not Available | Positive | 1003258 - 1003809 | 21000.5 |
| duf2544 domain-containing protein | EC382_RS04705 | Not Available | Negative | 1003923 - 1004762 | 30465.0 |
| fimbrial protein | EC382_RS04710 | Not Available | Negative | 1004763 - 1005287 | 18722.5 |
| fimbrial protein | EC382_RS04715 | Not Available | Negative | 1005284 - 1005760 | 17054.3 |
| fimbrial protein | EC382_RS04720 | Not Available | Negative | 1005757 - 1006260 | 17926.3 |
| fimbria/pilus periplasmic chaperone | EC382_RS04725 | Not Available | Negative | 1006276 - 1007028 | 27919.8 |
| fimbrial biogenesis outer membrane usher protein | EC382_RS04730 | Not Available | Negative | 1007051 - 1009690 | 96908.1 |
| type 1 fimbrial protein | EC382_RS04735 | Not Available | Negative | 1009772 - 1010335 | 19661.8 |
| phosphohistidine phosphatase sixa | EC382_RS04740 | Not Available | Negative | 1010981 - 1011466 | 17280.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





