Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-phosphoerythronate dehydrogenase pdxb | EC382_RS04645 | Not Available | Negative | 991323 - 992459 | 41327.1 |
| flagella biosynthesis regulator flk | EC382_RS04650 | Not Available | Positive | 992558 - 993553 | 36656.4 |
| arabinose transporter | EC382_RS04655 | Not Available | Negative | 993550 - 994728 | 40453.7 |
| beta-ketoacyl-acp synthase i | EC382_RS04660 | Not Available | Negative | 995037 - 996257 | 42615.8 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | EC382_RS04665 | Not Available | Positive | 996416 - 998422 | 74662.7 |
| yfcl family protein | EC382_RS04670 | Not Available | Negative | 998543 - 998821 | 10000.6 |
| elongation factor p hydroxylase | EC382_RS04675 | Not Available | Negative | 998855 - 999403 | 21146.6 |
| tsup family transporter | EC382_RS04680 | Not Available | Negative | 999403 - 1000212 | 28645.2 |
| penicillin-insensitive murein endopeptidase | EC382_RS04685 | Not Available | Negative | 1000212 - 1001036 | 30205.6 |
| chorismate synthase | EC382_RS04690 | Not Available | Negative | 1001040 - 1002125 | 39153.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





