Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine/arginine/ornithine abc transporter substrate-binding protein argt | EC382_RS04595 | Not Available | Negative | 981435 - 982217 | 27963.0 |
| ubix family flavin prenyltransferase | EC382_RS04600 | Not Available | Negative | 982483 - 983052 | 20696.3 |
| amidophosphoribosyltransferase | EC382_RS04605 | Not Available | Negative | 983147 - 984664 | 56505.3 |
| colicin v production protein | EC382_RS04610 | Not Available | Negative | 984701 - 985189 | 17991.0 |
| cell division protein dedd | EC382_RS04615 | Not Available | Negative | 985630 - 986292 | 22939.8 |
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | EC382_RS04620 | Not Available | Negative | 986282 - 987550 | 45453.2 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | EC382_RS04625 | Not Available | Negative | 987620 - 988534 | 33323.9 |
| deda family protein | EC382_RS04630 | Not Available | Negative | 988690 - 989349 | 24511.7 |
| trna pseudouridine(38-40) synthase trua | EC382_RS04635 | Not Available | Negative | 989432 - 990244 | 30370.2 |
| usg-1 protein | EC382_RS04640 | Not Available | Negative | 990244 - 991257 | 36366.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





